Project - Development of Automatic Quantitative SEM Image Analysis Method of Interconnected Porous Structure of Freeze-dried Biopolymeric Scaffolds Applicable in Tissue Engineering

Funding resources

Brno University of Technology - Vnitřní projekty VUT

- whole funder (2020-01-01 - 2021-12-31)

On the project

The main objective of this project is to propose and develop a new, advanced, more effective, objective, and user-friendly quantitative automatic SEM image analysis method of porous structure of freeze-dried scaffolds utilizing the state-of-the-art deep learning approaches, especially the convolutional neural networks. The proposed method will eliminate the person's error rate, significantly reduce the image processing time, improve the accuracy of segmentation and provide more information about the pore distribution.

Mark

CEITEC VUT/FEKT-J-20-6146

Default language

Czech

People responsible

Mekyska Jiří, doc. Ing., Ph.D. - fellow researcher
Mucha Ján, Ing., Ph.D. - fellow researcher
Vojtová Lucy, doc. Ing., Ph.D. - fellow researcher
Muchová Johana, Ing., Ph.D. - principal person responsible

Units

Advanced Biomaterials
- co-beneficiary (2020-01-01 - 2020-12-31)
Department of Telecommunications
- internal (2020-01-01 - 2020-12-31)
Faculty of Electrical Engineering and Communication
- internal (2020-01-01 - 2020-12-31)
Central European Institute of Technology BUT
- beneficiary (2020-01-01 - 2020-12-31)

Results

MUCHOVÁ, J.; HEARNDEN, V.; MICHLOVSKÁ, L.; VIŠTEJNOVÁ, L.; ZAVAĎÁKOVÁ, A.; ŠMERKOVÁ, K.; KOČIOVÁ, S.; ADAM, V.; KOPEL, P.; VOJTOVÁ, L. Mutual influence of selenium nanoparticles and FGF2-STAB® on biocompatible properties of collagen/chitosan 3D scaffolds: in vitro and ex ovo evaluation. Journal of Nanobiotechnology, 2021, vol. 19, no. 1, p. 1-16. ISSN: 1477-3155.
Detail

MUCHOVÁ, J.; HEARNDEN, V.; PAVLIŇÁKOVÁ, V.; VIŠTEJNOVÁ, L.; ZAVAĎÁKOVÁ, A.; ŠMERKOVÁ, K.; KOČIOVÁ, S.; ADAM, V.; KOPEL, P.; MUCHA, J.; VOJTOVÁ, L. Hodnocení biokompatibility obohacených pěnových hydrogelů včetně hodnocení distribuce pórů pomocí nové metody SEMIPE. XIII. mezinárodní konference„Bioimplantologie 2022“. 1. Praha: České vysoké učení technické v Praze, 2022. s. 15-15. ISBN: 978-80-01-06983-7.
Detail

VOJTOVÁ, L.; PAVLIŇÁKOVÁ, V.; MUCHOVÁ, J.; KACVINSKÁ, K.; BRTNÍKOVÁ, J.; KNOZ, M.; LIPOVÝ, B.; FALDYNA, M.; GÖPFERT, E.; HOLOUBEK, J.; PAVLOVSKÝ, Z.; VÍCENOVÁ, M.; BLAHNOVÁ, V.; HEARNDEN, V.; FILOVA, E. Healing and Angiogenic Properties of Collagen/Chitosan Scaffolds Enriched with Hyperstable FGF2-STAB(R) Protein: In Vitro, Ex Ovo and In Vivo Comprehensive Evaluation. Biomedicines, 2021, vol. 9, no. 6, p. 1-27. ISSN: 2227-9059.
Detail

MUCHA, J.; MUCHOVÁ, J.: SEMIPE; SEMIPE. online. URL: https://github.com/BDALab/SEMIPE.git. (software)
Detail

Responsibility: Muchová Johana, Ing., Ph.D.